Publications

2027

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2027

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2026

From Sewage to Salvage: Complete Characterization of Arefeen1 Phage Against MDR Pseudomonas aeruginosa (opens in new tab)

International Journal of Microbiology · MDR P. aeruginosa

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2026

Human Gut Phageome Analysis Uncovers Thousands of Highly Modular Endolysins (opens in new tab)

MicrobiologyOpen · gut phageome · endolysins

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2026

Isolation, characterization, and alginate hydrogel delivery of a Klebsiella aerogenes bacteriophage and its impact on biofilm degradation (opens in new tab)

Journal (ScienceDirect) · SGEB_KA1 · 175,095 bp · hydrogel

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2026

Biocontrol and antibiofilm potential of an Enterococcus faecalis bacteriophage in dairy and poultry products: Biological and genomic insights (opens in new tab)

Food Bioscience · EF_SBMB_01 · 147,482 bp · food biocontrol

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2026

Characterization and Therapeutic Potential of a Novel Bacteriophage Targeting Methicillin-Resistant Staphylococcus aureus Biofilms on Medical Devices (opens in new tab)

International Journal of Microbiology · MRSA · biofilm · catheters

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2025

Comparative genomics reveals diversity and taxonomic relationships among Clostridioides difficile phages (opens in new tab)

Microbiology Spectrum (ASM) · 44 genomes · taxonomy

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2025

Exploration of Human Skin Phageome to Reveal Endolysins and Novel Antimicrobial Peptides for Therapeutic Applications (opens in new tab)

MicrobiologyOpen · skin phageome · AMPs

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2024

Identification of Lytic Phages Against Multidrug-Resistant Klebsiella pneumoniae: Illuminating Hope on Antimicrobial-Resistance (opens in new tab)

PHAGE · K. pneumoniae · MDR

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2024

Functional Characterisation of a Novel Receptor Binding Domain from a Tail-Associated Lysin in a Clostridioides difficile Bacteriophage (opens in new tab)

UCC CORA (Thesis collection) · RBD · tail lysin

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2024

Identification of cell wall binding domains and repeats in Streptococcus pneumoniae phage endolysins: A molecular and diversity analysis (opens in new tab)

Biochemistry and Biophysics Reports · CBD · endolysins

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2023

Complete genome sequence of Escherichia phage iGC_PHA_EC001 (opens in new tab)

Microbiology Resource Announcements (ASM) · genome announcement

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2022

Proteome Exploration of Legionella pneumophila To Identify Novel Therapeutics: a Hierarchical Subtractive Genomics and Reverse Vaccinology Approach (opens in new tab)

Microbiology Spectrum (ASM) · vaccinology

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2021

Immunoinformatics and molecular dynamics approaches: Next generation vaccine design against West Nile virus (opens in new tab)

PLOS ONE · vaccine design

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2021

Characterization of an Endolysin Targeting Clostridioides difficile That Affects Spore Outgrowth (opens in new tab)

International Journal of Molecular Sciences · endolysin · spores

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2020

Comparative Genomics Study of Candidatus Carsonella Ruddii; an Endosymbiont of Economically Important Psyllids (opens in new tab)

Microbiology and Biotechnology Letters · symbiont · comparative

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2020

Reduced Genome of the Gut Symbiotic Bacterium “Candidatus Benitsuchiphilus tojoi” Provides Insight Into Its Possible Roles in Ecology and Adaptation of the Host Insect (opens in new tab)

Frontiers in Microbiology · symbiont genomics

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2020

Bacteriophage endolysins as a potential weapon to combat Clostridioides difficile infection (opens in new tab)

Gut Microbes · review · endolysins

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2018

Genome analysis of new Blattabacterium spp., obligatory endosymbionts of Periplaneta fuliginosa and P. japonica (opens in new tab)

PLOS ONE · endosymbionts

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2016

Genes essential for the morphogenesis of the Shiga toxin 2-transducing phage from Escherichia coli O157:H7 (opens in new tab)

Scientific Reports · Stx2 phage

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2015

The Shiga toxin 2 production level in enterohemorrhagic Escherichia coli O157:H7 is correlated with the subtypes of toxin-encoding phage (opens in new tab)

Scientific Reports · EHEC · Stx2

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